しかし方位磁石は頭にはなくからだの中にあった。

Sentence Analyzer

しかし 方位 磁石 なく からだ 中に あった

English Translation

But the compass isn't in the head of the bee, it's in the body.

Furigana

しかし方位(ほうい)磁石(じしゃく)(あたま)にはなくからだの(なか)にあった。

Romanji

Shikashi hōi jishaku wa atama ni wa naku karada no nakani atta.

Words

然し (しかし)
however; but
方位 (ほうい)
direction
磁石 (じしゃく、じせき)
magnet; compass
()
topic marker particle; indicates contrast with another option (stated or unstated); adds emphasis
(あたま、かしら)
head; hair (on one's head); mind; brains; intellect; leader; chief; boss; captain; top; tip; beginning; start; head; person; top structural component of a kanji
()
at (place, time); in; on; during; to (direction, state); toward; into; for (purpose); because of (reason); for; with; by; from; as (i.e. in the role of); per; in; for; a (e.g. "once a month"); and; in addition to; if; although
無い (ない)
nonexistent; not being (there); unpossessed; unowned; not had; unique; indicates negation, inexperience, unnecessariness or impossibility; not ...; to not be...; to have not ...
(からだ、しんたい、しんだい、しんてい)
body; torso; trunk; build; physique; constitution; health; corpse; dead body
()
indicates possessive; nominalizes verbs and adjectives; substitutes for "ga" in subordinate phrases; (at sentence-end, falling tone) indicates a confident conclusion; (at sentence-end) indicates emotional emphasis; (at sentence-end, rising tone) indicates question
有る (ある)
to be (usu. of inanimate objects); to exist; to live; to have; to be located; to be equipped with; to happen; to come about

Kanji

Readings: ホウ、 かた、 -かた、 -がた
Meanings: direction, person, alternative
Readings: イ、 くらい、 ぐらい
Meanings: rank, grade, throne, crown, about, some
Reading: 
Meanings: magnet, porcelain
Readings: セキ、 シャク、 コク、 いし
Meaning: stone
Readings: トウ、 ズ、 ト、 あたま、 かしら、 -がしら、 かぶり
Meanings: head, counter for large animals
Readings: チュウ、 なか、 うち、 あた.る
Meanings: in, inside, middle, mean, center